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  <title><![CDATA[Spire]]></title>
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  <description><![CDATA[Spire is a distributed, interdisciplinary research project exploring the use of semantic web technologies in support science in general and the field of ecoinformatics in particular. Spire has received funding from the National Science Foundation ITR program and additional funding is expected from several other government agencies.]]></description>
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  <title><![CDATA[Domain-based computational approaches to understand the molecular basis of diseases]]></title>
  <link>http://ebiquity.umbc.edu/resource/html/id/252/Domain-based-computational-approaches-to-understand-the-molecular-basis-of-diseases</link>
  <description><![CDATA[Protein domains, or domains, are the evolutionary, structural and functional units of the proteins. Despite the obvious relevance of domains to understanding biological process at the molecular level, most high-throughput experimental data relating molecular information to biological process, including diseases, is only analyzed at the gene or protein level. I will introduce a new approach, the protein domain profiling, to analyze clinical data derived from microarray and other experimental h...]]></description>
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  <description><![CDATA[Protein domains, or domains, are the evolutionary, structural and
functional units of the proteins. Despite the obvious relevance of
domains to understanding biological process at the molecular level,
most high-throughput experimental data relating molecular information
to biological process, including diseases, is only analyzed at the
gene or protein level. I will introduce a new approach, the protein
domain profiling, to analyze clinical data derived from microarray and
other experim...]]></description>
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  <description><![CDATA[Protein structure prediction has been a heuristic science.  From homology modeling, threading, to Monte Carlo fragment assembly, decoy clustering, selection, refinement, and consensus, there is no unified model or theory governing the complete process.

We believe the protein structure prediction problem will only be solved by a simple computational model.  We wish to find a single and simple mathematical model that encompasses all of above paradigms and that takes a sequence and converges ...]]></description>
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